AT1G12460.1
0.69092500000000001137
<html><body><title>AT1G12460.1</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u121246001000i/AT1G12460.1.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u121246001000i/AT1G12460.1.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u121246001000i/AT1G12460.1.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u320175001000i">AT3G01750.1</a></td><td>0.970704</td><td>ankyrin repeat family protein</td><td>OMAT3P000380</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u422878001000i">AT4G28780.1</a></td><td>0.96905</td><td>GDSL-motif lipase/hydrolase family protein</td><td>OMAT4P009410</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126545001000i">AT1G65450.1</a></td><td>0.96359</td><td>transferase family protein</td><td>OMAT1P018170</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123313001000i">AT1G33130.1</a></td><td>0.963396</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u423865001000i">AT4G38650.1</a></td><td>0.959817</td><td>glycosyl hydrolase family 10 protein</td><td>OMAT4P013470</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524004001000i">AT5G40040.1</a></td><td>0.959119</td><td>60S acidic ribosomal protein P2 (RPP2E)</td><td>OMAT5P109430</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u125526001000i">AT1G55260.1</a></td><td>0.955485</td><td>lipid binding</td><td>OMAT1P015400</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u324396001000i">AT3G43960.1</a></td><td>0.953363</td><td>cysteine proteinase, putative</td><td>OMAT3P109890</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126544501000i">AT1G65445.1</a></td><td>0.953094</td><td>transferase-related</td><td>OMAT1P018160</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524890501000i">AT5G48905.1</a></td><td>0.952232</td><td>LCR12 (Low-molecular-weight cysteine-rich 12)</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u120102001000i">AT1G01020.1</a></td><td>-0.88498</td><td>ARV1</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u523546001000i">AT5G35460.1</a></td><td>-0.722562</td><td>unknown protein</td><td>OMAT5P009760</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524047001000i">AT5G40470.1</a></td><td>-0.695638</td><td>FUNCTIONS IN: molecular_function unknown</td><td>OMAT5P109590</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420813801000i">AT4G08138.1</a></td><td>-0.652302</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u325377001000i">AT3G53770.1</a></td><td>-0.649322</td><td>late embryogenesis abundant protein-related / LEA protein-related</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u422135001000i">AT4G21350.1</a></td><td>-0.644532</td><td>PUB8 (PLANT U-BOX 8)</td><td>OMAT4P105380</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u423418001000i">AT4G34180.1</a></td><td>-0.644191</td><td>cyclase family protein</td><td>OMAT4P109980</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u522304001000i">AT5G23040.1</a></td><td>-0.641799</td><td>CDF1 (CELL GROWTH DEFECT FACTOR 1)</td><td>OMAT5P106710</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u520587001000i">AT5G05870.1</a></td><td>-0.64108</td><td>UGT76C1 (UDP-glucosyl transferase 76C1)</td><td>OMAT5P001930</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u324800001000i">AT3G48000.1</a></td><td>-0.639007</td><td>ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4)</td><td>OMAT3P110940</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u121246001000i/AT1G12460.1-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 3.34e-11</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>3.34e-11 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006508</td><td>proteolysis</td><td>13/200</td><td>3.10</td><td>9.16e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006629</td><td>lipid metabolic process</td><td>13/200</td><td>2.99</td><td>1.34e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009653</td><td>anatomical structure morphogenesis</td><td>10/200</td><td>2.97</td><td>6.15e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>12/200</td><td>2.30</td><td>2.38e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044281</td><td>small molecule metabolic process</td><td>16/200</td><td>1.78</td><td>9.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0012505</td><td>endomembrane system</td><td>70/200</td><td>2.88</td><td>1.01e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>142/200</td><td>1.55</td><td>1.27e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0031225</td><td>anchored to membrane</td><td>12/200</td><td>8.08</td><td>3.95e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0031224</td><td>intrinsic to membrane</td><td>17/200</td><td>3.17</td><td>8.43e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044425</td><td>membrane part</td><td>18/200</td><td>2.28</td><td>3.97e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0016787</td><td>hydrolase activity</td><td>38/200</td><td>2.43</td><td>9.17e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>5</td><td>GO:0004091</td><td>carboxylesterase activity</td><td>10/200</td><td>4.99</td><td>6.22e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016788</td><td>hydrolase activity, acting on ester bonds</td><td>14/200</td><td>2.36</td><td>1.00e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>135/200</td><td>1.66</td><td>4.48e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>149/200</td><td>1.54</td><td>1.05e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0020090</td><td>central cell</td><td>13/200</td><td>18.32</td><td>1.54e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>150/200</td><td>1.53</td><td>2.07e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>150/200</td><td>1.53</td><td>2.07e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>149/200</td><td>1.52</td><td>3.83e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>141/200</td><td>1.53</td><td>9.28e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>136/200</td><td>1.55</td><td>1.45e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0020092</td><td>female gametophyte</td><td>19/200</td><td>7.02</td><td>4.81e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>149/200</td><td>1.43</td><td>1.87e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>149/200</td><td>1.42</td><td>3.34e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>151/200</td><td>1.39</td><td>1.55e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>135/200</td><td>1.43</td><td>1.93e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>135/200</td><td>1.43</td><td>1.93e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>142/200</td><td>1.38</td><td>4.08e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>118/200</td><td>1.37</td><td>1.92e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>119/200</td><td>1.32</td><td>1.37e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>112/200</td><td>1.33</td><td>2.37e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>112/200</td><td>1.22</td><td>1.76e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>102/200</td><td>1.22</td><td>3.88e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>144/200</td><td>1.75</td><td>1.56e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>148/200</td><td>1.64</td><td>1.96e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>148/200</td><td>1.64</td><td>3.14e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>147/200</td><td>1.52</td><td>1.51e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>147/200</td><td>1.40</td><td>2.61e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>141/200</td><td>1.43</td><td>3.83e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>142/200</td><td>1.39</td><td>2.34e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>117/200</td><td>1.42</td><td>2.71e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>114/200</td><td>1.43</td><td>2.90e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>113/200</td><td>1.36</td><td>6.82e-06</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>globular</td><td>-</td><td>31/200</td><td>8.26</td><td>1.60e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>endomembrane</td><td>-</td><td>70/200</td><td>2.96</td><td>2.28e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>system</td><td>-</td><td>69/200</td><td>2.85</td><td>3.53e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>secreted</td><td>-</td><td>10/200</td><td>14.85</td><td>8.73e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>weight</td><td>-</td><td>10/200</td><td>14.85</td><td>8.73e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>similarity</td><td>-</td><td>15/200</td><td>6.24</td><td>3.22e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>anchored</td><td>-</td><td>12/200</td><td>7.82</td><td>5.79e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>embryo</td><td>-</td><td>25/200</td><td>3.60</td><td>8.22e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>cysteine</td><td>-</td><td>13/200</td><td>5.91</td><td>5.57e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>defensin</td><td>-</td><td>10/200</td><td>7.70</td><td>8.93e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>proteolysis</td><td>-</td><td>13/200</td><td>5.31</td><td>2.04e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>molecular</td><td>-</td><td>12/200</td><td>5.67</td><td>2.51e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>anthesis</td><td>-</td><td>33/200</td><td>2.51</td><td>3.15e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>stage</td><td>-</td><td>42/200</td><td>2.17</td><td>4.57e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>endopeptidase</td><td>-</td><td>11/200</td><td>5.84</td><td>4.95e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>49/200</td><td>1.92</td><td>1.84e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>inhibitor</td><td>-</td><td>13/200</td><td>4.35</td><td>2.17e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G12460&keyword=inhibitor">2.00E-22</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>sequence</td><td>-</td><td>14/200</td><td>3.68</td><td>7.46e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>peptidase</td><td>-</td><td>14/200</td><td>3.52</td><td>1.29e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>catalytic</td><td>-</td><td>23/200</td><td>2.26</td><td>8.70e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>hydrolase</td><td>-</td><td>18/200</td><td>2.47</td><td>1.45e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>differentiation</td><td>-</td><td>29/200</td><td>1.92</td><td>2.47e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>member</td><td>-</td><td>23/200</td><td>2.10</td><td>2.68e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>expansion</td><td>-</td><td>28/200</td><td>1.90</td><td>3.48e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>petal</td><td>-</td><td>27/200</td><td>1.85</td><td>6.84e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>small</td><td>-</td><td>11/200</td><td>2.73</td><td>8.00e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>bilateral</td><td>-</td><td>10/200</td><td>2.74</td><td>1.20e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>active</td><td>-</td><td>17/200</td><td>2.08</td><td>1.53e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>pollen</td><td>-</td><td>18/200</td><td>2.02</td><td>1.65e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>development</td><td>-</td><td>15/200</td><td>2.15</td><td>1.84e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>glycosyl</td><td>-</td><td>10/200</td><td>2.35</td><td>3.96e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>related</td><td>-</td><td>40/200</td><td>1.42</td><td>7.66e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>serine</td><td>-</td><td>16/200</td><td>1.80</td><td>8.42e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G12460&keyword=serine">5.00E-84</a></td><td>yes</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
with_OMAT_gene